Detailed information of deep learning profile BP000983.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000983.1
Cell line/tissue: Ishikawa
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR000BJC
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.21e-03 1.78e-03 -1.52e-04 0.00e+00 2.23e-05 -8.16e-05 0.00e+00 -1.24e-05 -5.73e-04 -3.39e-04 -5.40e-04 7.45e-04 8.59e-04 ]
C [ 1.09e-04 -5.97e-05 1.97e-04 0.00e+00 0.00e+00 -7.44e-05 2.27e-02 8.39e-03 6.43e-04 7.33e-05 1.52e-03 4.65e-03 2.87e-03 ]
G [ -1.66e-04 5.73e-04 0.00e+00 2.65e-02 0.00e+00 8.47e-05 0.00e+00 0.00e+00 2.21e-03 7.84e-03 3.55e-03 5.11e-04 1.04e-03 ]
T [ -1.80e-04 1.53e-03 1.15e-02 0.00e+00 1.76e-02 6.04e-03 0.00e+00 1.79e-03 3.45e-05 3.70e-04 -2.72e-04 -1.62e-04 -6.18e-04 ]

Frequency matrix

A [ 4584 3571 571 0 147 1736 28 1130 2858 2416 2445 2902 3294 ]
C [ 2179 2651 442 0 66 1497 11636 5524 2653 1443 3157 3691 3023 ]
G [ 1335 2034 92 11693 31 1020 1 88 2496 4735 3682 2524 2728 ]
T [ 3594 3437 10588 0 11449 7440 28 4951 3685 3099 2409 2576 2648 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages