Detailed information of deep learning profile BP000983.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in Ishikawa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000983.1
Cell line/tissue: Ishikawa
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR000BJC
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.18e-04 -1.62e-04 -2.72e-04 3.70e-04 3.45e-05 1.79e-03 0.00e+00 6.04e-03 1.76e-02 0.00e+00 1.15e-02 1.53e-03 -1.80e-04 ]
C [ 1.04e-03 5.11e-04 3.55e-03 7.84e-03 2.21e-03 0.00e+00 0.00e+00 8.47e-05 0.00e+00 2.65e-02 0.00e+00 5.73e-04 -1.66e-04 ]
G [ 2.87e-03 4.65e-03 1.52e-03 7.33e-05 6.43e-04 8.39e-03 2.27e-02 -7.44e-05 0.00e+00 0.00e+00 1.97e-04 -5.97e-05 1.09e-04 ]
T [ 8.59e-04 7.45e-04 -5.40e-04 -3.39e-04 -5.73e-04 -1.24e-05 0.00e+00 -8.16e-05 2.23e-05 0.00e+00 -1.52e-04 1.78e-03 5.21e-03 ]

Frequency matrix

A [ 2648 2576 2409 3099 3685 4951 28 7440 11449 0 10588 3437 3594 ]
C [ 2728 2524 3682 4735 2496 88 1 1020 31 11693 92 2034 1335 ]
G [ 3023 3691 3157 1443 2653 5524 11636 1497 66 0 442 2651 2179 ]
T [ 3294 2902 2445 2416 2858 1130 28 1736 147 0 571 3571 4584 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages