This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000987.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR755WXO |
| Model: | BPNet |
| A [ | -1.06e-03 | -3.79e-03 | -3.46e-03 | -4.60e-04 | -5.19e-04 | 9.34e-03 | -4.69e-04 | -3.00e-04 | -2.49e-03 | 2.14e-02 | -2.02e-03 | -5.80e-03 | -4.80e-04 | -3.36e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.38e-02 | 5.95e-02 | -6.03e-04 | 1.21e-01 | 1.87e-01 | 5.71e-02 | 7.08e-02 | 1.92e-01 | 5.96e-04 | -2.33e-03 | 1.24e-02 | 6.94e-03 | -2.58e-04 | -2.02e-03 | ] |
| G [ | 3.27e-02 | -7.14e-04 | 1.03e-01 | 2.29e-04 | -5.99e-05 | -6.36e-06 | -4.13e-05 | -3.06e-05 | -1.82e-04 | 1.60e-02 | 6.81e-02 | -6.21e-04 | 1.89e-01 | 9.86e-02 | ] |
| T [ | -3.50e-03 | 1.04e-02 | -3.93e-03 | -1.47e-03 | -7.84e-04 | -3.97e-03 | 2.26e-02 | -4.36e-04 | 8.18e-02 | -5.92e-03 | -2.28e-03 | 2.83e-02 | -5.47e-04 | -1.66e-03 | ] |
| A [ | 3258 | 1635 | 2750 | 2846 | 186 | 12575 | 266 | 10 | 1841 | 12562 | 1021 | 4388 | 0 | 2338 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10825 | 16213 | 915 | 29147 | 33307 | 18442 | 19141 | 33805 | 2229 | 2671 | 11756 | 4397 | 0 | 2173 | ] |
| G [ | 16486 | 1530 | 25739 | 1059 | 52 | 1187 | 225 | 5 | 918 | 13355 | 19183 | 1345 | 33846 | 26059 | ] |
| T [ | 3279 | 14470 | 4443 | 797 | 303 | 1644 | 14216 | 28 | 28860 | 5260 | 1889 | 23718 | 2 | 3278 | ] |
