This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000989.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR961SKY |
| Model: | BPNet |
| A [ | -9.64e-04 | -2.82e-03 | -2.89e-03 | -3.13e-04 | -6.15e-04 | 6.51e-03 | -4.85e-04 | -2.70e-04 | -2.25e-03 | 1.66e-02 | -1.94e-03 | -5.78e-03 | -5.05e-04 | -2.42e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.10e-02 | 4.90e-02 | 2.04e-05 | 9.98e-02 | 1.47e-01 | 4.73e-02 | 6.55e-02 | 1.56e-01 | 3.33e-04 | -1.87e-03 | 1.04e-02 | 7.52e-03 | -1.99e-04 | -1.45e-03 | ] |
| G [ | 2.63e-02 | -2.05e-04 | 7.90e-02 | 8.21e-04 | 2.15e-06 | 2.13e-04 | 2.10e-05 | -3.95e-05 | -9.76e-06 | 1.38e-02 | 5.64e-02 | -6.75e-04 | 1.59e-01 | 8.17e-02 | ] |
| T [ | -2.69e-03 | 8.01e-03 | -2.46e-03 | -1.55e-03 | -7.78e-04 | -3.64e-03 | 1.63e-02 | -3.49e-04 | 6.94e-02 | -4.49e-03 | -1.56e-03 | 2.64e-02 | -6.20e-04 | -1.57e-03 | ] |
| A [ | 2516 | 1327 | 1907 | 1685 | 57 | 10036 | 227 | 4 | 866 | 10107 | 647 | 3547 | 0 | 1877 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9361 | 13749 | 571 | 25447 | 28087 | 16288 | 15490 | 28283 | 1353 | 2040 | 9651 | 3437 | 0 | 1853 | ] |
| G [ | 13534 | 1047 | 22798 | 653 | 24 | 829 | 150 | 1 | 564 | 12083 | 16636 | 987 | 28296 | 21831 | ] |
| T [ | 2884 | 12173 | 3021 | 511 | 128 | 1143 | 12429 | 8 | 25513 | 4066 | 1361 | 20325 | 0 | 2734 | ] |
