Detailed information of deep learning profile BP000992.1

This page shows detailed deep learning-derived predictions and motifs for EBF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EBF1
Model ID: BP000992.1
Cell line/tissue: GM12878
Class: Rel homology region (RHR) factors
Family: Early B-Cell Factor-related factors
Best Match(es): MA0154.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UH73  
Source: ENCSR000DZQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.74e-03 -5.32e-05 -1.14e-03 -4.24e-04 2.27e-03 2.82e-03 -9.46e-06 8.51e-04 -1.80e-08 4.58e-02 ]
C [ 1.74e-02 1.31e-01 4.75e-02 9.79e-02 1.42e-03 -3.79e-04 0.00e+00 0.00e+00 -1.83e-06 -5.09e-04 ]
G [ -1.49e-03 -9.14e-07 -3.49e-05 -7.52e-05 -2.16e-04 9.86e-03 1.26e-01 9.15e-02 1.37e-01 2.71e-03 ]
T [ 2.13e-02 -3.77e-06 6.80e-03 -4.48e-04 4.92e-03 1.63e-03 -1.06e-07 -3.62e-05 -1.02e-05 -6.03e-04 ]

Frequency matrix

A [ 9962 869 9112 2889 25806 26901 1043 12062 56 59664 ]
C [ 29879 83436 46205 71526 23414 3071 66 232 442 5827 ]
G [ 8430 1473 1410 2248 7259 25411 84520 70020 84967 14801 ]
T [ 37664 157 29208 9271 29456 30552 306 3621 470 5643 ]

1 profiles found for the same TF (EBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001054.1 EBF1 ENCSR000BGU GM12878 Homo sapiens
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