Detailed information of deep learning profile BP000992.1

This page shows detailed deep learning-derived predictions and motifs for EBF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EBF1
Model ID: BP000992.1
Cell line/tissue: GM12878
Class: Rel homology region (RHR) factors
Family: Early B-Cell Factor-related factors
Best Match(es): MA0154.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UH73  
Source: ENCSR000DZQ
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.03e-04 -1.02e-05 -3.62e-05 -1.06e-07 1.63e-03 4.92e-03 -4.48e-04 6.80e-03 -3.77e-06 2.13e-02 ]
C [ 2.71e-03 1.37e-01 9.15e-02 1.26e-01 9.86e-03 -2.16e-04 -7.52e-05 -3.49e-05 -9.14e-07 -1.49e-03 ]
G [ -5.09e-04 -1.83e-06 0.00e+00 0.00e+00 -3.79e-04 1.42e-03 9.79e-02 4.75e-02 1.31e-01 1.74e-02 ]
T [ 4.58e-02 -1.80e-08 8.51e-04 -9.46e-06 2.82e-03 2.27e-03 -4.24e-04 -1.14e-03 -5.32e-05 -1.74e-03 ]

Frequency matrix

A [ 5643 470 3621 306 30552 29456 9271 29208 157 37664 ]
C [ 14801 84967 70020 84520 25411 7259 2248 1410 1473 8430 ]
G [ 5827 442 232 66 3071 23414 71526 46205 83436 29879 ]
T [ 59664 56 12062 1043 26901 25806 2889 9112 869 9962 ]

1 profiles found for the same TF (EBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001054.1 EBF1 ENCSR000BGU GM12878 Homo sapiens
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