Detailed information of deep learning profile BP000993.1

This page shows detailed deep learning-derived predictions and motifs for IRF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF1
Model ID: BP000993.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Best Match(es): MA0050.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10914  
Source: ENCSR854MCV
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.77e-02 -1.09e-03 -3.33e-03 8.06e-04 5.53e-02 7.23e-02 8.21e-02 1.59e-04 -2.22e-03 7.13e-04 6.70e-02 7.49e-02 7.36e-02 -5.07e-04 -2.12e-03 ]
C [ -1.26e-04 1.47e-03 5.72e-03 -2.34e-04 -4.88e-05 -3.47e-06 -2.48e-06 5.06e-03 8.14e-03 -4.20e-06 -5.89e-06 2.17e-06 -1.53e-06 1.63e-02 5.05e-03 ]
G [ 5.58e-04 4.02e-03 -8.25e-04 3.72e-02 1.92e-04 7.58e-06 -4.12e-06 2.04e-02 -1.74e-04 7.64e-02 -3.50e-05 1.23e-04 -8.90e-07 2.35e-02 -8.97e-04 ]
T [ -5.83e-04 -4.92e-04 3.89e-03 -3.20e-04 -3.80e-05 2.94e-05 -2.96e-05 -9.74e-05 2.52e-02 3.19e-06 -3.75e-06 -1.04e-05 1.24e-04 -2.05e-04 1.85e-02 ]

Frequency matrix

A [ 3664 2482 2253 2776 7680 8613 8844 2317 1606 368 8716 8889 8865 267 1026 ]
C [ 1306 1805 2019 790 116 6 14 2214 1762 6 28 11 7 3495 2678 ]
G [ 1903 2421 2187 4651 934 152 31 3919 398 8538 163 6 33 5039 580 ]
T [ 2044 2210 2458 700 187 146 28 467 5151 5 10 11 12 116 4633 ]

Other motif patterns

3 profiles found for the same TF (IRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000312.1 IRF1 ENCSR000EGL K562 Homo sapiens
BP000418.1 IRF1 ENCSR000EGK K562 Homo sapiens
BP000595.1 IRF1 ENCSR890DSP HepG2 Homo sapiens
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