Detailed information of deep learning profile BP000993.1

This page shows detailed deep learning-derived predictions and motifs for IRF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: IRF1
Model ID: BP000993.1
Cell line/tissue: K562
Class: Tryptophan cluster factors
Family: Interferon-regulatory factors
Best Match(es): MA0050.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P10914  
Source: ENCSR854MCV
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.85e-02 -2.05e-04 1.24e-04 -1.04e-05 -3.75e-06 3.19e-06 2.52e-02 -9.74e-05 -2.96e-05 2.94e-05 -3.80e-05 -3.20e-04 3.89e-03 -4.92e-04 -5.83e-04 ]
C [ -8.97e-04 2.35e-02 -8.90e-07 1.23e-04 -3.50e-05 7.64e-02 -1.74e-04 2.04e-02 -4.12e-06 7.58e-06 1.92e-04 3.72e-02 -8.25e-04 4.02e-03 5.58e-04 ]
G [ 5.05e-03 1.63e-02 -1.53e-06 2.17e-06 -5.89e-06 -4.20e-06 8.14e-03 5.06e-03 -2.48e-06 -3.47e-06 -4.88e-05 -2.34e-04 5.72e-03 1.47e-03 -1.26e-04 ]
T [ -2.12e-03 -5.07e-04 7.36e-02 7.49e-02 6.70e-02 7.13e-04 -2.22e-03 1.59e-04 8.21e-02 7.23e-02 5.53e-02 8.06e-04 -3.33e-03 -1.09e-03 1.77e-02 ]

Frequency matrix

A [ 4633 116 12 11 10 5 5151 467 28 146 187 700 2458 2210 2044 ]
C [ 580 5039 33 6 163 8538 398 3919 31 152 934 4651 2187 2421 1903 ]
G [ 2678 3495 7 11 28 6 1762 2214 14 6 116 790 2019 1805 1306 ]
T [ 1026 267 8865 8889 8716 368 1606 2317 8844 8613 7680 2776 2253 2482 3664 ]

Other motif patterns

3 profiles found for the same TF (IRF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000312.1 IRF1 ENCSR000EGL K562 Homo sapiens
BP000418.1 IRF1 ENCSR000EGK K562 Homo sapiens
BP000595.1 IRF1 ENCSR890DSP HepG2 Homo sapiens
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