Detailed information of deep learning profile BP000995.1

This page shows detailed deep learning-derived predictions and motifs for E2F4 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F4
Model ID: BP000995.1
Cell line/tissue: GM12878
Class: Fork head/winged helix factors
Family: E2F
Best Match(es): MA0470.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16254  
Source: ENCSR000DYY
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.99e-04 -6.26e-04 -5.02e-05 3.42e-05 0.00e+00 1.34e-05 -5.96e-05 5.60e-04 ]
C [ 1.23e-03 9.73e-03 1.71e-03 3.68e-02 8.88e-06 3.12e-02 1.64e-03 5.21e-03 ]
G [ 1.27e-03 2.32e-03 1.54e-02 5.60e-06 3.81e-02 4.75e-05 1.75e-02 9.40e-04 ]
T [ 5.38e-03 -3.56e-04 -2.41e-04 -1.70e-05 -6.79e-05 -2.12e-05 -3.93e-04 -5.43e-04 ]

Frequency matrix

A [ 5042 4808 1700 7 0 34 439 6218 ]
C [ 9700 10451 9601 30218 24 29789 6582 9591 ]
G [ 8370 11670 16821 41 30241 425 21508 9917 ]
T [ 7155 3339 2145 1 2 19 1739 4541 ]

Alternative motif patterns (AMPs)

6 profiles found for the same TF (E2F4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000521.1 E2F4 ENCSR264OKN WTC11 Homo sapiens
BP000648.1 E2F4 ENCSR000EVL HeLa-S3 Homo sapiens
BP000799.1 E2F4 ENCSR368GJN K562 Homo sapiens
BP001001.1 E2F4 ENCSR000DOR MCF 10A Homo sapiens
BP001123.1 E2F4 ENCSR000EWL K562 Homo sapiens
BP001161.1 E2F4 ENCSR924LSO HepG2 Homo sapiens
Showing 6 profiles of page 1 from 1 pages
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