Detailed information of deep learning profile BP000995.1

This page shows detailed deep learning-derived predictions and motifs for E2F4 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F4
Model ID: BP000995.1
Cell line/tissue: GM12878
Class: Fork head/winged helix factors
Family: E2F
Best Match(es): MA0470.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16254  
Source: ENCSR000DYY
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.43e-04 -3.93e-04 -2.12e-05 -6.79e-05 -1.70e-05 -2.41e-04 -3.56e-04 5.38e-03 ]
C [ 9.40e-04 1.75e-02 4.75e-05 3.81e-02 5.60e-06 1.54e-02 2.32e-03 1.27e-03 ]
G [ 5.21e-03 1.64e-03 3.12e-02 8.88e-06 3.68e-02 1.71e-03 9.73e-03 1.23e-03 ]
T [ 5.60e-04 -5.96e-05 1.34e-05 0.00e+00 3.42e-05 -5.02e-05 -6.26e-04 -4.99e-04 ]

Frequency matrix

A [ 4541 1739 19 2 1 2145 3339 7155 ]
C [ 9917 21508 425 30241 41 16821 11670 8370 ]
G [ 9591 6582 29789 24 30218 9601 10451 9700 ]
T [ 6218 439 34 0 7 1700 4808 5042 ]

Alternative motif patterns (AMPs)

6 profiles found for the same TF (E2F4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000521.1 E2F4 ENCSR264OKN WTC11 Homo sapiens
BP000648.1 E2F4 ENCSR000EVL HeLa-S3 Homo sapiens
BP000799.1 E2F4 ENCSR368GJN K562 Homo sapiens
BP001001.1 E2F4 ENCSR000DOR MCF 10A Homo sapiens
BP001123.1 E2F4 ENCSR000EWL K562 Homo sapiens
BP001161.1 E2F4 ENCSR924LSO HepG2 Homo sapiens
Showing 6 profiles of page 1 from 1 pages
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