This page shows detailed deep learning-derived predictions and motifs for CTCF in HeLa-S3 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000996.1 |
| Cell line/tissue: | HeLa-S3 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DLO |
| Model: | BPNet |
| A [ | -6.09e-04 | -4.11e-03 | -2.83e-03 | -5.14e-04 | -9.78e-04 | 6.09e-03 | -1.05e-03 | -6.32e-04 | -2.68e-03 | 2.20e-02 | -2.82e-03 | -5.81e-03 | -1.35e-03 | -3.34e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.97e-03 | 6.22e-02 | -4.46e-04 | 1.23e-01 | 1.94e-01 | 6.30e-02 | 9.51e-02 | 2.07e-01 | 1.91e-03 | -2.33e-03 | 1.54e-02 | 5.22e-03 | -8.53e-04 | -2.44e-03 | ] |
| G [ | 3.57e-02 | 5.75e-05 | 9.21e-02 | 1.13e-03 | -8.98e-05 | -7.20e-04 | -3.63e-04 | -1.17e-04 | -5.54e-04 | 1.50e-02 | 5.51e-02 | 7.09e-04 | 1.84e-01 | 9.25e-02 | ] |
| T [ | -2.98e-03 | 1.02e-02 | -4.27e-03 | -2.41e-03 | -1.43e-03 | -6.55e-03 | 1.48e-02 | -5.45e-04 | 7.83e-02 | -4.47e-03 | -1.73e-03 | 2.84e-02 | -1.75e-03 | -2.47e-03 | ] |
| A [ | 8681 | 4404 | 7568 | 6307 | 1044 | 23919 | 903 | 130 | 5479 | 24625 | 2655 | 12412 | 309 | 4929 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 19714 | 32794 | 3494 | 56068 | 66420 | 36005 | 44006 | 68458 | 6752 | 6270 | 25309 | 7483 | 157 | 4799 | ] |
| G [ | 32722 | 5110 | 45483 | 3807 | 313 | 2288 | 424 | 23 | 1698 | 26322 | 35863 | 3674 | 67323 | 52073 | ] |
| T [ | 7731 | 26541 | 12304 | 2666 | 1071 | 6635 | 23516 | 237 | 54920 | 11632 | 5021 | 45278 | 1059 | 7047 | ] |
