This page shows detailed deep learning-derived predictions and motifs for CTCF in gastrocnemius medialis using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000998.1 |
| Cell line/tissue: | gastrocnemius medialis |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR998NQG |
| Model: | BPNet |
| A [ | -8.91e-04 | -1.69e-03 | -1.63e-03 | -6.58e-04 | -3.25e-04 | 4.15e-03 | -2.06e-04 | -1.52e-04 | -1.23e-03 | 1.29e-02 | -1.02e-03 | -2.88e-03 | -2.60e-04 | -1.68e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.64e-03 | 3.99e-02 | -2.36e-04 | 7.41e-02 | 1.19e-01 | 3.44e-02 | 5.10e-02 | 1.25e-01 | 4.11e-04 | -1.67e-03 | 7.60e-03 | 6.03e-03 | -1.03e-04 | -1.20e-03 | ] |
| G [ | 2.10e-02 | -2.78e-04 | 6.59e-02 | -7.66e-05 | -8.56e-05 | -1.63e-04 | -2.72e-05 | -3.93e-05 | -2.94e-04 | 1.31e-02 | 4.79e-02 | -5.13e-04 | 1.27e-01 | 6.97e-02 | ] |
| T [ | -1.59e-03 | 7.76e-03 | -1.76e-03 | -6.97e-04 | -4.39e-04 | -1.72e-03 | 1.59e-02 | -2.43e-04 | 5.92e-02 | -3.82e-03 | -1.13e-03 | 2.45e-02 | -3.46e-04 | -1.19e-03 | ] |
| A [ | 2240 | 1277 | 2189 | 2114 | 292 | 9001 | 264 | 104 | 1302 | 8810 | 690 | 3028 | 78 | 1351 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7951 | 12644 | 938 | 21301 | 24631 | 13787 | 15229 | 25083 | 1893 | 2058 | 8338 | 3963 | 49 | 1467 | ] |
| G [ | 12701 | 1515 | 18991 | 1196 | 182 | 1283 | 298 | 57 | 925 | 10849 | 15246 | 1077 | 25080 | 20430 | ] |
| T [ | 2571 | 10027 | 3345 | 852 | 358 | 1392 | 9672 | 219 | 21344 | 3746 | 1188 | 17395 | 256 | 2215 | ] |
