Detailed information of deep learning profile BP001001.1

This page shows detailed deep learning-derived predictions and motifs for E2F4 in MCF 10A using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: E2F4
Model ID: BP001001.1
Cell line/tissue: MCF 10A
Class: Fork head/winged helix factors
Family: E2F
Best Match(es): MA0470.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q16254  
Source: ENCSR000DOR
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.99e-04 -6.40e-04 1.12e-05 -5.51e-06 -1.26e-05 -2.76e-06 -2.30e-04 ]
C [ 1.84e-03 2.63e-02 1.27e-03 6.79e-02 2.98e-06 4.02e-02 1.05e-02 ]
G [ 4.74e-03 3.33e-03 4.44e-02 0.00e+00 5.94e-02 8.43e-04 6.82e-03 ]
T [ 6.39e-03 -2.03e-04 0.00e+00 -9.83e-07 -4.30e-05 -1.60e-05 -1.13e-03 ]

Frequency matrix

A [ 16741 8366 2168 14 161 2289 15922 ]
C [ 35126 65640 7310 105208 596 75966 38141 ]
G [ 28676 26099 94601 27 103869 23232 29120 ]
T [ 24719 5156 1183 12 635 3775 22078 ]

6 profiles found for the same TF (E2F4) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000521.1 E2F4 ENCSR264OKN WTC11 Homo sapiens
BP000648.1 E2F4 ENCSR000EVL HeLa-S3 Homo sapiens
BP000799.1 E2F4 ENCSR368GJN K562 Homo sapiens
BP000995.1 E2F4 ENCSR000DYY GM12878 Homo sapiens
BP001123.1 E2F4 ENCSR000EWL K562 Homo sapiens
BP001161.1 E2F4 ENCSR924LSO HepG2 Homo sapiens
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