This page shows detailed deep learning-derived predictions and motifs for CTCF in GM23338 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001002.1 |
| Cell line/tissue: | GM23338 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR932ZMX |
| Model: | BPNet |
| A [ | -1.66e-03 | -1.62e-03 | 1.34e-02 | -8.47e-04 | -2.72e-03 | 4.23e-02 | -2.66e-04 | 9.09e-03 | -5.23e-03 | -7.91e-04 | -1.70e-03 | -4.53e-03 | 5.02e-03 | -2.42e-03 | -2.47e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 5.34e-02 | 1.10e-01 | 2.35e-03 | 3.19e-02 | 1.11e-02 | -2.72e-04 | -4.88e-05 | -1.44e-04 | -1.61e-04 | 8.14e-05 | 5.98e-04 | 7.71e-02 | 3.85e-04 | 3.22e-02 | 1.43e-02 | ] |
| G [ | -1.32e-03 | -8.56e-04 | 6.26e-03 | 9.80e-03 | -9.61e-04 | 2.19e-03 | 1.39e-01 | 7.22e-02 | 4.40e-02 | 1.38e-01 | 9.59e-02 | -4.52e-04 | 5.48e-02 | 8.27e-03 | -8.18e-04 | ] |
| T [ | -2.11e-03 | -1.22e-03 | -3.92e-03 | -2.13e-03 | 1.11e-02 | -2.17e-03 | -5.70e-04 | -7.75e-04 | 4.44e-03 | -6.02e-04 | -3.47e-04 | -2.70e-03 | -3.04e-03 | -1.24e-03 | 1.01e-02 | ] |
| A [ | 12388 | 6685 | 58431 | 10466 | 18012 | 79570 | 1560 | 34189 | 10956 | 202 | 3484 | 18229 | 37810 | 10964 | 15850 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 73930 | 94126 | 8972 | 50473 | 40731 | 3167 | 218 | 667 | 3187 | 129 | 5675 | 72761 | 7784 | 52724 | 36819 | ] |
| G [ | 10863 | 2849 | 17245 | 39535 | 12193 | 12615 | 103184 | 69671 | 58690 | 105329 | 88014 | 5291 | 53689 | 30047 | 12146 | ] |
| T [ | 8718 | 2240 | 21252 | 5427 | 34964 | 10547 | 938 | 1373 | 33068 | 240 | 8726 | 9619 | 6617 | 12166 | 41085 | ] |
