Detailed information of deep learning profile BP001005.1

This page shows detailed deep learning-derived predictions and motifs for LEF1 in K562 using a single trained BPNet model.

Model details

Name: LEF1
Model ID: BP001005.1
Cell line/tissue: K562
Class: High-mobility group (HMG) domain factors
Family: TCF-7-related factors
Best Match(es): MA0768.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P27782  
Source: ENCSR832OGB
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.55e-02 -2.27e-05 2.32e-02 -4.48e-05 2.83e-04 3.15e-02 3.22e-02 2.66e-02 -1.50e-04 -2.02e-04 ]
C [ -8.37e-05 1.05e-02 -2.04e-05 3.65e-06 1.84e-02 0.00e+00 -3.66e-05 2.70e-06 1.18e-05 1.79e-04 ]
G [ -4.97e-04 9.15e-03 2.34e-06 7.28e-07 -3.35e-04 0.00e+00 -5.64e-05 -5.10e-05 2.19e-02 5.04e-03 ]
T [ 6.98e-05 -3.99e-05 2.45e-03 3.95e-02 -7.88e-05 1.02e-05 0.00e+00 -3.05e-05 -6.09e-05 -5.72e-04 ]

Frequency matrix

A [ 2609 95 2365 163 241 3546 3521 3444 394 1029 ]
C [ 174 1805 69 9 2681 1 41 71 239 725 ]
G [ 448 1573 45 31 524 12 69 84 2931 1451 ]
T [ 417 175 1169 3445 202 89 17 49 84 443 ]

Other motif patterns