Detailed information of deep learning profile BP001005.1

This page shows detailed deep learning-derived predictions and motifs for LEF1 in K562 using a single trained BPNet model.

Model details

Name: LEF1
Model ID: BP001005.1
Cell line/tissue: K562
Class: High-mobility group (HMG) domain factors
Family: TCF-7-related factors
Best Match(es): MA0768.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P27782  
Source: ENCSR832OGB
Model: BPNet

Contribution weight matrix (CWM)

A [ -5.72e-04 -6.09e-05 -3.05e-05 0.00e+00 1.02e-05 -7.88e-05 3.95e-02 2.45e-03 -3.99e-05 6.98e-05 ]
C [ 5.04e-03 2.19e-02 -5.10e-05 -5.64e-05 0.00e+00 -3.35e-04 7.28e-07 2.34e-06 9.15e-03 -4.97e-04 ]
G [ 1.79e-04 1.18e-05 2.70e-06 -3.66e-05 0.00e+00 1.84e-02 3.65e-06 -2.04e-05 1.05e-02 -8.37e-05 ]
T [ -2.02e-04 -1.50e-04 2.66e-02 3.22e-02 3.15e-02 2.83e-04 -4.48e-05 2.32e-02 -2.27e-05 1.55e-02 ]

Frequency matrix

A [ 443 84 49 17 89 202 3445 1169 175 417 ]
C [ 1451 2931 84 69 12 524 31 45 1573 448 ]
G [ 725 239 71 41 1 2681 9 69 1805 174 ]
T [ 1029 394 3444 3521 3546 241 163 2365 95 2609 ]

Other motif patterns