Detailed information of deep learning profile BP001007.1

This page shows detailed deep learning-derived predictions and motifs for TBX3 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TBX3
Model ID: BP001007.1
Cell line/tissue: HepG2
Class: T-Box factors
Family: TBX2-related factors
Best Match(es): MA1566.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O15119  
Source: ENCSR605YWG
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.96e-04 6.89e-04 -4.92e-05 5.74e-06 4.29e-04 8.07e-03 0.00e+00 8.52e-03 -6.53e-06 8.14e-04 2.84e-05 ]
C [ 1.06e-03 1.82e-04 3.17e-05 2.00e-04 1.01e-03 -3.35e-05 1.72e-02 -9.45e-06 1.39e-02 1.47e-03 1.35e-04 ]
G [ 3.59e-05 1.71e-03 4.86e-04 1.68e-05 2.40e-03 7.25e-05 0.00e+00 2.15e-04 -6.46e-06 5.77e-04 3.37e-05 ]
T [ 2.02e-03 -4.76e-05 4.06e-03 8.71e-03 5.28e-04 2.86e-04 0.00e+00 4.19e-06 2.71e-05 -3.10e-04 3.19e-03 ]

Frequency matrix

A [ 5298 5726 3340 2280 4831 14347 2 16953 144 7067 3404 ]
C [ 6040 5191 5849 2513 6159 722 20264 228 19836 6933 5125 ]
G [ 2798 4068 3249 809 5981 2508 0 1578 124 1840 2738 ]
T [ 6130 5281 7828 14664 3295 2689 0 1507 162 4427 8999 ]

1 profiles found for the same TF (TBX3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000333.1 TBX3 ENCSR238QRG HepG2 Homo sapiens
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