Detailed information of deep learning profile BP001007.1

This page shows detailed deep learning-derived predictions and motifs for TBX3 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TBX3
Model ID: BP001007.1
Cell line/tissue: HepG2
Class: T-Box factors
Family: TBX2-related factors
Best Match(es): MA1566.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O15119  
Source: ENCSR605YWG
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.19e-03 -3.10e-04 2.71e-05 4.19e-06 0.00e+00 2.86e-04 5.28e-04 8.71e-03 4.06e-03 -4.76e-05 2.02e-03 ]
C [ 3.37e-05 5.77e-04 -6.46e-06 2.15e-04 0.00e+00 7.25e-05 2.40e-03 1.68e-05 4.86e-04 1.71e-03 3.59e-05 ]
G [ 1.35e-04 1.47e-03 1.39e-02 -9.45e-06 1.72e-02 -3.35e-05 1.01e-03 2.00e-04 3.17e-05 1.82e-04 1.06e-03 ]
T [ 2.84e-05 8.14e-04 -6.53e-06 8.52e-03 0.00e+00 8.07e-03 4.29e-04 5.74e-06 -4.92e-05 6.89e-04 3.96e-04 ]

Frequency matrix

A [ 8999 4427 162 1507 0 2689 3295 14664 7828 5281 6130 ]
C [ 2738 1840 124 1578 0 2508 5981 809 3249 4068 2798 ]
G [ 5125 6933 19836 228 20264 722 6159 2513 5849 5191 6040 ]
T [ 3404 7067 144 16953 2 14347 4831 2280 3340 5726 5298 ]

1 profiles found for the same TF (TBX3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000333.1 TBX3 ENCSR238QRG HepG2 Homo sapiens
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