This page shows detailed deep learning-derived predictions and motifs for CTCF in vagina using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001009.1 |
| Cell line/tissue: | vagina |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR606TNN |
| Model: | BPNet |
| A [ | -1.20e-03 | -4.89e-04 | 2.22e-02 | -1.49e-03 | -4.32e-03 | 6.01e-02 | -2.44e-04 | 1.62e-02 | -2.25e-03 | -5.15e-04 | -8.26e-04 | -1.75e-03 | 7.65e-03 | -2.31e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.30e-02 | 1.41e-01 | -5.40e-04 | 5.43e-02 | 1.43e-02 | -8.10e-05 | -2.12e-05 | 2.00e-05 | -2.07e-06 | -4.68e-05 | -1.94e-04 | 6.84e-02 | -6.69e-04 | 2.23e-02 | ] |
| G [ | -1.46e-03 | -1.27e-04 | 5.28e-03 | 9.61e-03 | -1.63e-03 | 3.26e-04 | 1.37e-01 | 5.24e-02 | 3.94e-02 | 1.26e-01 | 8.05e-02 | -5.49e-04 | 4.01e-02 | 9.67e-03 | ] |
| T [ | -2.07e-03 | -3.38e-04 | -3.73e-03 | -1.11e-03 | 1.33e-02 | -1.53e-03 | -2.11e-04 | -2.95e-04 | 4.74e-03 | -3.37e-04 | -3.31e-04 | -2.22e-03 | -1.98e-03 | -8.94e-04 | ] |
| A [ | 2475 | 373 | 18164 | 1349 | 3984 | 22139 | 216 | 9745 | 1481 | 236 | 608 | 3505 | 10726 | 2647 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 20563 | 25587 | 1037 | 15080 | 11195 | 862 | 33 | 194 | 1259 | 63 | 711 | 19861 | 1135 | 12780 | ] |
| G [ | 1576 | 101 | 3892 | 9035 | 2094 | 1837 | 25821 | 16077 | 13654 | 25705 | 22929 | 691 | 13250 | 8531 | ] |
| T [ | 1562 | 114 | 3082 | 711 | 8901 | 1337 | 105 | 159 | 9781 | 171 | 1927 | 2118 | 1064 | 2217 | ] |
