Detailed information of deep learning profile BP001010.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001010.1
Cell line/tissue: A549
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BHX
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.44e-03 -6.77e-04 8.74e-07 1.06e-01 -1.18e-06 5.44e-03 -1.87e-04 -5.78e-06 1.04e-02 -2.41e-03 ]
C [ -4.19e-04 9.48e-05 1.38e-01 -6.66e-06 9.86e-02 6.70e-05 2.47e-04 7.68e-06 -8.86e-04 1.72e-02 ]
G [ 4.26e-02 -6.37e-04 1.00e-05 1.83e-05 1.90e-04 6.92e-02 -2.43e-04 1.31e-01 2.25e-03 -4.55e-04 ]
T [ -2.35e-04 4.48e-02 0.00e+00 -9.58e-06 8.31e-04 -1.59e-05 8.41e-02 -8.23e-06 -2.00e-03 4.16e-03 ]

Frequency matrix

A [ 4908 1601 78 21130 70 5530 816 26 8247 1841 ]
C [ 2663 5059 21579 113 18117 1366 764 65 3917 10058 ]
G [ 13084 2945 33 304 1201 14576 497 21434 7262 3970 ]
T [ 1040 12089 5 148 2307 223 19618 170 2270 5826 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000844.1 USF1 ENCSR000BIU H1 Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001029.1 USF1 ENCSR000BGM HepG2 Homo sapiens
Showing 10 profiles of page 1 from 2 pages