Detailed information of deep learning profile BP001012.1

This page shows detailed deep learning-derived predictions and motifs for SP2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: SP2
Model ID: BP001012.1
Cell line/tissue: HepG2
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0516.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q02086  
Source: ENCSR946RZN
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.77e-03 2.16e-03 1.61e-03 1.12e-03 2.60e-03 2.88e-03 1.17e-03 9.12e-04 8.43e-04 2.37e-04 -8.30e-05 -3.00e-04 -2.72e-04 -4.15e-04 -6.50e-05 -7.43e-04 -4.38e-04 1.49e-03 6.61e-04 -2.61e-04 8.38e-04 7.33e-05 9.15e-05 -6.79e-05 9.79e-06 4.03e-05 2.05e-04 1.13e-02 -2.62e-04 ]
C [ 3.22e-03 3.06e-03 4.61e-03 4.25e-03 2.86e-03 2.88e-03 3.40e-03 2.44e-03 1.90e-03 2.00e-03 1.77e-03 2.14e-03 2.81e-03 2.76e-03 2.26e-03 1.32e-03 1.58e-03 6.75e-04 2.49e-04 2.70e-04 2.56e-04 2.52e-04 3.48e-04 3.00e-02 1.50e-04 3.43e-04 3.75e-04 1.56e-03 1.19e-02 ]
G [ 2.92e-03 3.16e-03 3.33e-03 4.17e-03 4.36e-03 3.20e-03 2.19e-03 2.70e-03 3.23e-03 1.93e-03 1.42e-03 2.69e-03 2.46e-03 2.63e-03 3.24e-03 3.08e-03 1.79e-03 2.02e-03 5.66e-03 5.71e-03 6.54e-03 2.14e-02 2.36e-02 7.98e-05 2.90e-02 2.06e-02 9.96e-03 -9.34e-04 3.34e-04 ]
T [ 2.04e-03 2.80e-03 2.44e-03 1.61e-03 1.35e-03 6.60e-04 2.42e-03 9.66e-04 3.17e-04 8.07e-04 2.70e-04 -4.21e-04 -5.79e-04 -6.56e-04 -7.91e-04 -9.36e-06 -3.39e-04 -8.93e-04 -4.37e-04 3.73e-04 1.19e-04 5.48e-05 2.17e-04 4.19e-05 3.79e-05 1.93e-05 -1.53e-04 -3.08e-04 -3.96e-04 ]

Frequency matrix

A [ 556 609 577 567 554 575 561 547 530 549 629 587 636 584 628 421 677 1230 827 540 902 36 5 3 1 10 334 1828 360 ]
C [ 992 924 1049 973 914 913 1002 981 978 1016 890 910 994 971 977 934 919 626 290 105 87 23 7 3287 2 26 71 628 2353 ]
G [ 1222 1247 1164 1242 1289 1251 1239 1278 1258 1210 1221 1332 1236 1391 1339 1469 1243 1035 1976 2252 2229 3236 3286 0 3297 3240 2783 613 285 ]
T [ 530 520 510 518 543 561 498 494 534 525 560 471 434 354 356 476 461 409 207 403 82 5 2 10 0 24 112 231 302 ]

1 profiles found for the same TF (SP2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000169.1 SP2 ENCSR807LQP HEK293 Homo sapiens
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