This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001013.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR779YTI |
| Model: | BPNet |
| A [ | -1.37e-03 | -3.80e-03 | -3.59e-03 | -7.25e-04 | -5.54e-04 | 6.64e-03 | -5.88e-04 | -3.34e-04 | -2.96e-03 | 1.98e-02 | -2.25e-03 | -6.90e-03 | -4.64e-04 | -3.01e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.44e-02 | 6.23e-02 | -5.29e-04 | 1.24e-01 | 1.81e-01 | 5.81e-02 | 7.26e-02 | 1.81e-01 | 9.86e-04 | -1.79e-03 | 1.37e-02 | 6.93e-03 | -2.01e-04 | -1.85e-03 | ] |
| G [ | 3.68e-02 | -8.18e-04 | 1.02e-01 | 2.22e-04 | 2.80e-05 | 5.35e-04 | 9.11e-05 | -2.10e-05 | 1.19e-04 | 1.57e-02 | 6.23e-02 | -5.29e-04 | 1.83e-01 | 9.04e-02 | ] |
| T [ | -3.93e-03 | 8.28e-03 | -4.22e-03 | -1.56e-03 | -7.20e-04 | -4.37e-03 | 1.88e-02 | -4.55e-04 | 7.10e-02 | -5.91e-03 | -2.26e-03 | 2.70e-02 | -6.05e-04 | -1.92e-03 | ] |
| A [ | 4007 | 1560 | 3429 | 3162 | 305 | 15004 | 333 | 194 | 2800 | 14527 | 1437 | 5572 | 0 | 2963 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12538 | 20872 | 1316 | 34678 | 39497 | 20943 | 24861 | 39611 | 3752 | 3602 | 14544 | 5867 | 1 | 2936 | ] |
| G [ | 19914 | 1799 | 29775 | 1474 | 113 | 1851 | 397 | 72 | 1494 | 15432 | 21811 | 1814 | 40280 | 30194 | ] |
| T [ | 3823 | 16052 | 5762 | 969 | 368 | 2485 | 14692 | 406 | 32237 | 6722 | 2492 | 27030 | 2 | 4190 | ] |
