This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001015.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR595BPR |
| Model: | BPNet |
| A [ | -7.56e-04 | -2.59e-03 | -2.95e-03 | -2.98e-04 | -4.72e-04 | 4.93e-03 | -4.25e-04 | -2.11e-04 | -1.85e-03 | 1.74e-02 | -1.51e-03 | -5.14e-03 | -5.28e-04 | -2.42e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.52e-03 | 4.60e-02 | -3.32e-04 | 9.38e-02 | 1.44e-01 | 4.93e-02 | 6.53e-02 | 1.52e-01 | 5.64e-04 | -1.97e-03 | 1.02e-02 | 6.88e-03 | -2.09e-04 | -1.52e-03 | ] |
| G [ | 2.47e-02 | -3.01e-04 | 7.65e-02 | 3.99e-04 | -4.18e-05 | 3.98e-05 | -5.47e-06 | -2.14e-05 | -1.14e-04 | 1.52e-02 | 5.59e-02 | -3.95e-04 | 1.54e-01 | 8.42e-02 | ] |
| T [ | -2.31e-03 | 6.52e-03 | -2.56e-03 | -1.25e-03 | -7.02e-04 | -3.16e-03 | 1.47e-02 | -3.02e-04 | 7.00e-02 | -4.24e-03 | -1.57e-03 | 2.53e-02 | -6.42e-04 | -1.47e-03 | ] |
| A [ | 3008 | 1644 | 2560 | 2487 | 182 | 11320 | 260 | 13 | 1427 | 11560 | 856 | 4113 | 45 | 1995 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10375 | 16534 | 877 | 28770 | 32264 | 18571 | 19675 | 32780 | 2003 | 2642 | 11473 | 4842 | 45 | 1949 | ] |
| G [ | 16207 | 1514 | 25113 | 877 | 84 | 1275 | 205 | 2 | 868 | 13843 | 18733 | 1321 | 32526 | 25907 | ] |
| T [ | 3225 | 13122 | 4263 | 680 | 284 | 1648 | 12674 | 19 | 28516 | 4770 | 1752 | 22539 | 198 | 2964 | ] |
