This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001016.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR979PTL |
| Model: | BPNet |
| A [ | -1.71e-03 | -3.49e-03 | -3.29e-03 | -3.61e-04 | -4.51e-04 | 7.46e-03 | -4.26e-04 | -3.26e-04 | -2.63e-03 | 1.79e-02 | -2.03e-03 | -6.07e-03 | -5.47e-04 | -2.90e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.41e-02 | 5.66e-02 | -6.41e-04 | 1.15e-01 | 1.71e-01 | 5.21e-02 | 6.67e-02 | 1.70e-01 | 1.06e-03 | -1.96e-03 | 1.32e-02 | 7.98e-03 | -2.84e-04 | -1.72e-03 | ] |
| G [ | 3.34e-02 | -7.69e-04 | 9.55e-02 | 3.09e-05 | -2.98e-05 | 2.35e-04 | 6.69e-05 | -2.98e-05 | -5.77e-05 | 1.65e-02 | 5.97e-02 | -6.03e-04 | 1.67e-01 | 8.53e-02 | ] |
| T [ | -3.31e-03 | 1.08e-02 | -3.44e-03 | -1.38e-03 | -6.41e-04 | -3.66e-03 | 1.83e-02 | -4.01e-04 | 6.84e-02 | -5.80e-03 | -1.93e-03 | 2.59e-02 | -8.35e-04 | -1.70e-03 | ] |
| A [ | 3745 | 1881 | 3281 | 3224 | 318 | 13866 | 330 | 87 | 2482 | 14097 | 1313 | 5180 | 78 | 2704 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11982 | 18996 | 1261 | 32882 | 37631 | 20926 | 22316 | 38140 | 3142 | 3357 | 13593 | 5485 | 96 | 2702 | ] |
| G [ | 18973 | 1815 | 28371 | 1407 | 78 | 1650 | 430 | 40 | 1295 | 14905 | 21263 | 1779 | 38020 | 29248 | ] |
| T [ | 3801 | 15809 | 5589 | 988 | 474 | 2060 | 15425 | 234 | 31583 | 6142 | 2332 | 26057 | 307 | 3846 | ] |
