This page shows detailed deep learning-derived predictions and motifs for CTCF in brain using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001017.1 |
| Cell line/tissue: | brain |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR930SOT |
| Model: | BPNet |
| A [ | -9.17e-04 | -2.93e-03 | -2.41e-03 | -3.71e-04 | -6.15e-04 | 4.22e-03 | -5.34e-04 | -3.01e-04 | -2.16e-03 | 1.63e-02 | -1.90e-03 | -4.81e-03 | -4.16e-04 | -2.38e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.06e-02 | 4.34e-02 | 2.45e-05 | 8.90e-02 | 1.38e-01 | 5.04e-02 | 6.64e-02 | 1.54e-01 | 1.04e-03 | -1.52e-03 | 1.18e-02 | 4.69e-03 | -2.60e-04 | -1.47e-03 | ] |
| G [ | 2.49e-02 | 5.30e-04 | 6.92e-02 | 1.34e-03 | -8.71e-05 | -9.16e-05 | -1.30e-04 | -4.90e-05 | -1.22e-04 | 1.33e-02 | 5.18e-02 | -3.97e-05 | 1.52e-01 | 8.07e-02 | ] |
| T [ | -2.23e-03 | 6.82e-03 | -2.56e-03 | -1.52e-03 | -9.54e-04 | -3.95e-03 | 1.30e-02 | -3.01e-04 | 6.05e-02 | -4.35e-03 | -1.71e-03 | 2.03e-02 | -5.82e-04 | -1.49e-03 | ] |
| A [ | 6044 | 3615 | 4794 | 4426 | 868 | 16256 | 769 | 249 | 3398 | 18185 | 1698 | 7974 | 2 | 3105 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15375 | 23695 | 2985 | 40660 | 48269 | 28475 | 31247 | 49945 | 4513 | 4416 | 17559 | 7014 | 6 | 3241 | ] |
| G [ | 23384 | 4271 | 34368 | 3625 | 582 | 2396 | 630 | 86 | 1767 | 20153 | 28432 | 2413 | 50697 | 39774 | ] |
| T [ | 5905 | 19127 | 8561 | 1996 | 990 | 3581 | 18062 | 428 | 41029 | 7954 | 3018 | 33307 | 3 | 4588 | ] |
