This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001018.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000BHV |
| Model: | BPNet |
| A [ | -1.31e-03 | -3.85e-03 | -3.20e-03 | -3.71e-04 | -5.05e-04 | 6.95e-03 | -5.92e-04 | -2.91e-04 | -2.42e-03 | 1.65e-02 | -2.32e-03 | -5.15e-03 | -7.91e-04 | -2.80e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.94e-03 | 5.72e-02 | -7.96e-04 | 1.12e-01 | 1.64e-01 | 5.51e-02 | 6.94e-02 | 1.76e-01 | 6.46e-04 | -1.79e-03 | 1.23e-02 | 5.65e-03 | -4.71e-04 | -1.65e-03 | ] |
| G [ | 3.55e-02 | -3.83e-04 | 9.56e-02 | 2.40e-04 | -5.08e-05 | -2.71e-04 | -8.92e-05 | -6.11e-05 | -2.76e-04 | 1.36e-02 | 5.55e-02 | -1.74e-04 | 1.63e-01 | 7.97e-02 | ] |
| T [ | -3.20e-03 | 7.36e-03 | -4.18e-03 | -1.66e-03 | -7.86e-04 | -4.65e-03 | 1.78e-02 | -4.29e-04 | 7.18e-02 | -4.95e-03 | -1.90e-03 | 2.44e-02 | -1.07e-03 | -1.96e-03 | ] |
| A [ | 5216 | 2760 | 4272 | 4036 | 157 | 17873 | 543 | 316 | 3536 | 17814 | 1875 | 7684 | 576 | 3794 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14942 | 24909 | 1468 | 43809 | 50152 | 27490 | 30123 | 49660 | 4580 | 4744 | 17908 | 7449 | 655 | 3872 | ] |
| G [ | 25460 | 2628 | 37388 | 1616 | 36 | 1735 | 366 | 117 | 1498 | 19718 | 27214 | 2936 | 47748 | 37473 | ] |
| T [ | 5015 | 20335 | 7505 | 1171 | 288 | 3535 | 19600 | 540 | 41019 | 8357 | 3637 | 32564 | 1654 | 5494 | ] |