This page shows detailed deep learning-derived predictions and motifs for CTCF in astrocyte of the spinal cord using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001020.1 |
| Cell line/tissue: | astrocyte of the spinal cord |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DSU |
| Model: | BPNet |
| A [ | -2.08e-03 | -1.36e-03 | 2.11e-02 | -1.39e-03 | -4.54e-03 | 7.02e-02 | -4.72e-04 | 1.19e-02 | -4.93e-03 | -1.03e-03 | -2.15e-03 | -3.09e-03 | 5.80e-03 | -2.98e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.86e-02 | 1.59e-01 | 1.00e-04 | 5.29e-02 | 1.53e-02 | -3.97e-04 | -1.00e-04 | -2.22e-04 | -2.86e-04 | -1.09e-04 | 1.69e-03 | 7.04e-02 | 7.46e-04 | 2.84e-02 | ] |
| G [ | -1.68e-03 | -5.96e-04 | 6.51e-03 | 1.18e-02 | -2.17e-03 | 1.43e-03 | 1.66e-01 | 7.38e-02 | 5.25e-02 | 1.52e-01 | 9.44e-02 | 5.67e-04 | 4.78e-02 | 9.56e-03 | ] |
| T [ | -2.71e-03 | -8.35e-04 | -5.43e-03 | -2.09e-03 | 1.77e-02 | -2.17e-03 | -3.19e-04 | -7.48e-04 | 1.70e-03 | -8.62e-04 | -1.06e-03 | -3.01e-03 | -3.25e-03 | -9.35e-04 | ] |
| A [ | 5465 | 1646 | 37171 | 4004 | 9179 | 47903 | 424 | 20567 | 5115 | 1096 | 2527 | 10284 | 21425 | 6640 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 45672 | 56187 | 3243 | 32207 | 23536 | 1687 | 96 | 594 | 2543 | 539 | 3890 | 39588 | 4711 | 28065 | ] |
| G [ | 3970 | 468 | 8941 | 20534 | 5120 | 5260 | 57970 | 36660 | 33142 | 56141 | 47466 | 3256 | 28524 | 17109 | ] |
| T [ | 3642 | 447 | 9393 | 2002 | 20912 | 3898 | 258 | 927 | 17948 | 972 | 4865 | 5619 | 4087 | 6934 | ] |