This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001022.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR705DNM |
| Model: | BPNet |
| A [ | -1.59e-03 | -5.65e-04 | 3.01e-02 | -1.57e-03 | -5.57e-03 | 7.94e-02 | -2.87e-04 | 2.27e-02 | -2.99e-03 | -6.56e-04 | -1.31e-03 | -2.61e-03 | 9.61e-03 | -2.92e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.14e-02 | 1.75e-01 | -6.17e-04 | 6.51e-02 | 1.61e-02 | -1.28e-04 | -3.09e-05 | -2.05e-05 | 6.78e-05 | -2.69e-05 | 2.62e-04 | 9.56e-02 | -6.11e-04 | 3.22e-02 | ] |
| G [ | -1.77e-03 | -2.26e-04 | 6.98e-03 | 1.14e-02 | -2.27e-03 | 3.31e-04 | 1.76e-01 | 6.70e-02 | 5.33e-02 | 1.69e-01 | 1.15e-01 | -5.70e-04 | 5.60e-02 | 1.28e-02 | ] |
| T [ | -2.65e-03 | -4.86e-04 | -5.17e-03 | -1.75e-03 | 2.06e-02 | -2.36e-03 | -2.55e-04 | -4.12e-04 | 6.74e-03 | -4.85e-04 | -4.23e-04 | -3.27e-03 | -3.30e-03 | -1.69e-03 | ] |
| A [ | 2666 | 2 | 20778 | 1396 | 4395 | 25184 | 49 | 12229 | 1269 | 261 | 652 | 3684 | 12420 | 2933 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 22927 | 28984 | 984 | 17182 | 11600 | 731 | 9 | 153 | 930 | 49 | 903 | 22292 | 1249 | 14061 | ] |
| G [ | 1575 | 0 | 3807 | 9631 | 2109 | 1724 | 28915 | 16418 | 15954 | 28513 | 25153 | 727 | 13942 | 9291 | ] |
| T [ | 1820 | 3 | 3420 | 780 | 10885 | 1350 | 16 | 189 | 10836 | 166 | 2281 | 2286 | 1378 | 2703 | ] |
