This page shows detailed deep learning-derived predictions and motifs for CTCF in heart right ventricle using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001025.1 |
| Cell line/tissue: | heart right ventricle |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR587KPW |
| Model: | BPNet |
| A [ | -1.69e-03 | -5.28e-04 | 2.48e-02 | -1.20e-03 | -4.17e-03 | 6.48e-02 | -2.60e-04 | 1.70e-02 | -2.18e-03 | -5.20e-04 | -8.07e-04 | -2.17e-03 | 7.09e-03 | -2.39e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.21e-02 | 1.34e-01 | -6.87e-04 | 4.87e-02 | 1.21e-02 | -3.02e-04 | -3.13e-05 | -3.26e-05 | -2.68e-04 | -5.34e-05 | -1.60e-04 | 7.63e-02 | -6.63e-04 | 2.53e-02 | ] |
| G [ | -1.40e-03 | -2.45e-04 | 5.83e-03 | 7.64e-03 | -2.30e-03 | 1.97e-04 | 1.36e-01 | 5.23e-02 | 4.08e-02 | 1.30e-01 | 8.40e-02 | -5.52e-04 | 4.60e-02 | 9.32e-03 | ] |
| T [ | -2.17e-03 | -3.55e-04 | -3.81e-03 | -1.31e-03 | 1.59e-02 | -1.48e-03 | -1.84e-04 | -3.22e-04 | 5.09e-03 | -3.40e-04 | -3.69e-04 | -2.54e-03 | -2.36e-03 | -1.34e-03 | ] |
| A [ | 2320 | 430 | 18415 | 1263 | 3925 | 22799 | 115 | 10864 | 1112 | 172 | 598 | 3383 | 10934 | 2478 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 21195 | 25731 | 892 | 15625 | 10947 | 756 | 16 | 175 | 887 | 24 | 802 | 20371 | 1089 | 13247 | ] |
| G [ | 1378 | 132 | 4178 | 8858 | 2043 | 1692 | 26232 | 15161 | 14906 | 26157 | 22931 | 645 | 13289 | 8455 | ] |
| T [ | 1529 | 130 | 2938 | 677 | 9508 | 1176 | 60 | 223 | 9518 | 70 | 2092 | 2024 | 1111 | 2243 | ] |
