This page shows detailed deep learning-derived predictions and motifs for CTCF in psoas muscle using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001026.1 |
| Cell line/tissue: | psoas muscle |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR984IUE |
| Model: | BPNet |
| A [ | -1.72e-03 | -3.52e-03 | -3.08e-03 | -2.37e-04 | -4.79e-04 | 8.77e-03 | -5.59e-04 | -2.97e-04 | -2.29e-03 | 2.11e-02 | -2.08e-03 | -5.22e-03 | -6.94e-04 | -2.96e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.29e-02 | 5.94e-02 | -1.17e-03 | 1.15e-01 | 1.80e-01 | 5.27e-02 | 7.44e-02 | 1.92e-01 | 5.38e-05 | -2.84e-03 | 1.26e-02 | 8.16e-03 | -4.51e-04 | -2.41e-03 | ] |
| G [ | 3.31e-02 | -8.83e-04 | 9.89e-02 | -4.42e-04 | -5.14e-05 | -1.71e-04 | -6.43e-05 | -8.49e-05 | -2.74e-04 | 1.75e-02 | 6.12e-02 | -7.50e-04 | 1.92e-01 | 9.62e-02 | ] |
| T [ | -2.55e-03 | 1.09e-02 | -2.41e-03 | -1.29e-03 | -6.47e-04 | -4.14e-03 | 2.23e-02 | -3.47e-04 | 8.62e-02 | -5.16e-03 | -1.63e-03 | 3.04e-02 | -9.26e-04 | -1.55e-03 | ] |
| A [ | 3185 | 1666 | 2744 | 2686 | 126 | 13336 | 303 | 151 | 2050 | 12392 | 1181 | 4771 | 106 | 2345 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11642 | 17731 | 766 | 31967 | 35617 | 18972 | 20987 | 35500 | 2830 | 3272 | 12998 | 5382 | 84 | 2499 | ] |
| G [ | 17710 | 1504 | 27897 | 777 | 37 | 1575 | 323 | 72 | 1323 | 14784 | 19664 | 1682 | 35402 | 27522 | ] |
| T [ | 3482 | 15119 | 4613 | 590 | 240 | 2137 | 14407 | 297 | 29817 | 5572 | 2178 | 24185 | 428 | 3653 | ] |
