Detailed information of deep learning profile BP001029.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001029.1
Cell line/tissue: HepG2
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BGM
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.53e-03 -2.45e-03 -2.29e-05 9.47e-02 -3.28e-05 4.35e-04 -1.03e-05 2.49e-06 4.70e-02 -5.54e-04 ]
C [ -6.11e-04 5.15e-03 1.45e-01 -2.98e-04 7.68e-02 -2.68e-04 2.50e-06 1.10e-05 -8.64e-04 4.57e-02 ]
G [ 1.62e-02 -1.95e-03 2.44e-06 1.31e-05 -3.92e-04 1.13e-01 -1.82e-05 1.52e-01 5.37e-04 -5.23e-04 ]
T [ -2.90e-03 9.65e-03 -6.14e-06 -3.22e-04 7.33e-03 5.88e-07 1.17e-01 -4.84e-07 -9.00e-04 4.01e-03 ]

Frequency matrix

A [ 13422 6073 481 42281 246 1614 398 24 24578 2835 ]
C [ 9721 18413 47339 1846 30759 967 546 49 6759 26964 ]
G [ 19887 8873 75 1707 3362 45364 503 47767 12547 6483 ]
T [ 4948 14618 83 2143 13611 33 46531 138 4094 11696 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000844.1 USF1 ENCSR000BIU H1 Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001010.1 USF1 ENCSR000BHX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages