Detailed information of deep learning profile BP001030.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP001030.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR290ZOS
Model: BPNet

Contribution weight matrix (CWM)

A [ -7.21e-04 1.15e-04 -5.74e-04 -1.26e-06 -1.78e-05 3.12e-04 8.93e-06 0.00e+00 -1.08e-03 -2.06e-05 -2.92e-04 ]
C [ 9.90e-04 -2.87e-05 3.37e-02 1.64e-05 5.55e-06 0.00e+00 0.00e+00 1.86e-06 2.78e-02 -1.21e-05 -2.81e-04 ]
G [ -1.69e-03 2.89e-02 -1.99e-04 6.65e-02 8.57e-03 5.01e-02 5.10e-02 6.73e-02 -4.49e-07 5.37e-02 1.65e-02 ]
T [ 7.44e-03 -1.18e-04 -1.02e-03 0.00e+00 1.84e-02 -1.98e-05 -3.72e-06 0.00e+00 8.66e-04 -1.40e-04 1.66e-03 ]

Frequency matrix

A [ 1650 1108 2220 63 230 612 118 17 1560 351 687 ]
C [ 2270 1432 6263 33 739 356 304 68 7174 86 838 ]
G [ 4280 8015 962 10863 6530 9961 10487 10876 394 10362 7909 ]
T [ 2772 418 1528 14 3474 44 64 12 1844 174 1539 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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