Detailed information of deep learning profile BP001030.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP001030.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR290ZOS
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.66e-03 -1.40e-04 8.66e-04 0.00e+00 -3.72e-06 -1.98e-05 1.84e-02 0.00e+00 -1.02e-03 -1.18e-04 7.44e-03 ]
C [ 1.65e-02 5.37e-02 -4.49e-07 6.73e-02 5.10e-02 5.01e-02 8.57e-03 6.65e-02 -1.99e-04 2.89e-02 -1.69e-03 ]
G [ -2.81e-04 -1.21e-05 2.78e-02 1.86e-06 0.00e+00 0.00e+00 5.55e-06 1.64e-05 3.37e-02 -2.87e-05 9.90e-04 ]
T [ -2.92e-04 -2.06e-05 -1.08e-03 0.00e+00 8.93e-06 3.12e-04 -1.78e-05 -1.26e-06 -5.74e-04 1.15e-04 -7.21e-04 ]

Frequency matrix

A [ 1539 174 1844 12 64 44 3474 14 1528 418 2772 ]
C [ 7909 10362 394 10876 10487 9961 6530 10863 962 8015 4280 ]
G [ 838 86 7174 68 304 356 739 33 6263 1432 2270 ]
T [ 687 351 1560 17 118 612 230 63 2220 1108 1650 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000330.1 EGR1 ENCSR024CNP K562 Homo sapiens
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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