Detailed information of deep learning profile BP001031.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP001031.1
Cell line/tissue: K562
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR787CHF
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.62e-03 -1.64e-03 -2.47e-05 6.73e-02 -2.75e-05 1.80e-04 -2.97e-05 -5.73e-06 2.80e-02 -4.83e-04 ]
C [ 8.76e-05 4.57e-03 1.04e-01 -2.00e-04 5.71e-02 -4.44e-05 2.49e-05 3.94e-05 -2.36e-04 3.62e-02 ]
G [ 1.47e-02 -2.22e-04 1.17e-05 8.01e-05 -2.96e-04 9.13e-02 -1.17e-05 1.08e-01 1.22e-03 -1.00e-04 ]
T [ -2.14e-03 7.30e-03 -1.52e-05 -3.47e-04 5.64e-03 -4.46e-06 8.06e-02 -1.28e-05 -8.77e-04 1.97e-03 ]

Frequency matrix

A [ 10664 5389 384 36875 292 627 474 46 18755 3056 ]
C [ 9362 15132 42048 1672 28433 602 777 96 7503 22344 ]
G [ 17913 9045 135 1943 3294 41415 520 42369 12049 7392 ]
T [ 4718 13091 90 2168 10639 13 40886 146 4350 9865 ]

Alternative motif patterns (AMPs)

Other motif patterns

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000253.1 USF1 ENCSR000BGI GM12878 Homo sapiens
BP000381.1 USF1 ENCSR000BTZ SK-N-SH Homo sapiens
BP000422.1 USF1 ENCSR099FCQ HepG2 Homo sapiens
BP000512.1 USF1 ENCSR000BPV A549 Homo sapiens
BP000514.1 USF1 ENCSR000BSX Ishikawa Homo sapiens
BP000844.1 USF1 ENCSR000BIU H1 Homo sapiens
BP000934.1 USF1 ENCSR000BMF SK-N-SH Homo sapiens
BP000968.1 USF1 ENCSR000BJB A549 Homo sapiens
BP000990.1 USF1 ENCSR000BVK HCT116 Homo sapiens
BP001010.1 USF1 ENCSR000BHX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages