Detailed information of deep learning profile BP001032.1

This page shows detailed deep learning-derived predictions and motifs for MEF2C in GM12878 using a single trained BPNet model.

Model details

Name: MEF2C
Model ID: BP001032.1
Cell line/tissue: GM12878
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0497.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06413  
Source: ENCSR000BNG
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.14e-03 -9.00e-04 -2.18e-05 4.74e-02 1.55e-03 2.54e-03 9.63e-04 6.03e-03 -1.09e-03 3.68e-02 -5.45e-04 1.93e-03 ]
C [ -7.17e-04 2.69e-02 3.29e-04 -3.34e-05 -9.02e-05 -2.35e-04 -5.22e-04 -4.94e-04 -9.31e-05 -3.12e-06 -3.41e-04 6.15e-03 ]
G [ 7.00e-03 -4.63e-04 0.00e+00 -6.45e-05 -3.51e-05 -2.78e-04 -8.45e-05 -1.84e-04 -3.35e-04 8.70e-05 2.46e-02 -8.80e-04 ]
T [ 2.11e-03 7.08e-04 5.17e-02 -3.10e-04 3.36e-02 2.69e-02 3.06e-02 1.55e-02 2.83e-02 -1.22e-04 -1.45e-03 -1.13e-03 ]

Frequency matrix

A [ 1929 893 14 10922 1456 1708 1405 3235 1197 11324 2355 4129 ]
C [ 1080 6582 305 41 69 159 536 459 605 13 724 3500 ]
G [ 3864 1450 5 131 56 144 47 150 516 291 7354 1220 ]
T [ 4829 2778 11378 608 10120 9691 9714 7858 9384 74 1269 2853 ]

Alternative motif patterns (AMPs)