Detailed information of deep learning profile BP001032.1

This page shows detailed deep learning-derived predictions and motifs for MEF2C in GM12878 using a single trained BPNet model.

Model details

Name: MEF2C
Model ID: BP001032.1
Cell line/tissue: GM12878
Class: MADS box factors
Family: Regulators of differentiation
Best Match(es): MA0497.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06413  
Source: ENCSR000BNG
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.13e-03 -1.45e-03 -1.22e-04 2.83e-02 1.55e-02 3.06e-02 2.69e-02 3.36e-02 -3.10e-04 5.17e-02 7.08e-04 2.11e-03 ]
C [ -8.80e-04 2.46e-02 8.70e-05 -3.35e-04 -1.84e-04 -8.45e-05 -2.78e-04 -3.51e-05 -6.45e-05 0.00e+00 -4.63e-04 7.00e-03 ]
G [ 6.15e-03 -3.41e-04 -3.12e-06 -9.31e-05 -4.94e-04 -5.22e-04 -2.35e-04 -9.02e-05 -3.34e-05 3.29e-04 2.69e-02 -7.17e-04 ]
T [ 1.93e-03 -5.45e-04 3.68e-02 -1.09e-03 6.03e-03 9.63e-04 2.54e-03 1.55e-03 4.74e-02 -2.18e-05 -9.00e-04 -1.14e-03 ]

Frequency matrix

A [ 2853 1269 74 9384 7858 9714 9691 10120 608 11378 2778 4829 ]
C [ 1220 7354 291 516 150 47 144 56 131 5 1450 3864 ]
G [ 3500 724 13 605 459 536 159 69 41 305 6582 1080 ]
T [ 4129 2355 11324 1197 3235 1405 1708 1456 10922 14 893 1929 ]

Alternative motif patterns (AMPs)