Detailed information of deep learning profile BP001033.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HEK293T using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP001033.1
Cell line/tissue: HEK293T
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR094WHO
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.87e-06 8.72e-04 2.56e-05 2.37e-06 1.38e-05 8.59e-03 1.63e-04 1.76e-03 -1.29e-04 3.54e-03 ]
C [ -2.20e-05 -2.78e-05 -9.29e-06 -4.47e-05 -7.50e-05 -5.56e-05 5.06e-03 -3.85e-04 7.91e-04 -7.63e-05 ]
G [ -3.50e-05 5.46e-03 -1.61e-05 5.43e-05 -4.50e-04 -2.38e-05 -3.38e-05 -5.33e-06 -1.85e-04 -6.10e-05 ]
T [ 6.88e-03 5.82e-06 7.54e-03 6.79e-03 6.30e-03 -3.39e-05 1.37e-04 1.42e-03 2.98e-03 5.16e-04 ]

Frequency matrix

A [ 155 414 78 28 146 2031 301 890 256 1049 ]
C [ 37 36 26 13 46 5 1499 192 511 134 ]
G [ 67 1626 9 118 179 135 40 115 321 227 ]
T [ 1933 116 2079 2033 1821 21 352 995 1104 782 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000880.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages