Detailed information of deep learning profile BP001033.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in HEK293T using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP001033.1
Cell line/tissue: HEK293T
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR094WHO
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.16e-04 2.98e-03 1.42e-03 1.37e-04 -3.39e-05 6.30e-03 6.79e-03 7.54e-03 5.82e-06 6.88e-03 ]
C [ -6.10e-05 -1.85e-04 -5.33e-06 -3.38e-05 -2.38e-05 -4.50e-04 5.43e-05 -1.61e-05 5.46e-03 -3.50e-05 ]
G [ -7.63e-05 7.91e-04 -3.85e-04 5.06e-03 -5.56e-05 -7.50e-05 -4.47e-05 -9.29e-06 -2.78e-05 -2.20e-05 ]
T [ 3.54e-03 -1.29e-04 1.76e-03 1.63e-04 8.59e-03 1.38e-05 2.37e-06 2.56e-05 8.72e-04 -3.87e-06 ]

Frequency matrix

A [ 782 1104 995 352 21 1821 2033 2079 116 1933 ]
C [ 227 321 115 40 135 179 118 9 1626 67 ]
G [ 134 511 192 1499 5 46 13 26 36 37 ]
T [ 1049 256 890 301 2031 146 28 78 414 155 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000233.1 FOXA1 ENCSR126YEB MCF-7 Homo sapiens
BP000287.1 FOXA1 ENCSR000BMO HepG2 Homo sapiens
BP000429.1 FOXA1 ENCSR267DFA HepG2 Homo sapiens
BP000465.1 FOXA1 ENCSR324RCI liver Homo sapiens
BP000621.1 FOXA1 ENCSR000BKY T47D Homo sapiens
BP000807.1 FOXA1 ENCSR000BRD A549 Homo sapiens
BP000816.1 FOXA1 ENCSR819LHG K562 Homo sapiens
BP000880.1 FOXA1 ENCSR000BLE HepG2 Homo sapiens
BP000958.1 FOXA1 ENCSR735KEY liver Homo sapiens
BP001046.1 FOXA1 ENCSR000BPX A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages