Detailed information of deep learning profile BP001035.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001035.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR773NQB
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.25e-03 1.93e-05 5.89e-03 5.64e-02 1.29e-06 2.94e-02 -5.50e-04 2.06e-03 2.25e-03 -2.14e-03 -1.29e-05 -8.05e-04 1.14e-03 -4.70e-04 -1.88e-03 ]
C [ -1.03e-04 -1.27e-06 -1.46e-03 -1.57e-06 8.38e-02 -8.18e-05 1.24e-03 -5.79e-04 3.78e-03 2.24e-03 -1.99e-05 -5.53e-04 -3.41e-04 3.42e-02 5.82e-03 ]
G [ 5.35e-03 5.90e-02 -6.75e-04 -2.48e-05 0.00e+00 1.54e-03 8.47e-04 -7.29e-04 9.05e-04 -1.59e-03 7.20e-02 -5.85e-04 -1.35e-03 -3.04e-04 -5.19e-05 ]
T [ -1.49e-03 6.12e-06 2.18e-03 -8.70e-05 1.46e-07 -4.84e-04 5.74e-03 2.55e-03 -9.39e-04 1.64e-02 8.96e-06 4.22e-02 3.49e-03 -7.60e-04 5.10e-03 ]

Frequency matrix

A [ 13678 1251 12060 27212 1 22268 4947 8740 7814 6937 3 3974 6925 5892 5532 ]
C [ 635 62 3780 110 28736 587 7186 5942 8804 1903 4 2722 6792 14992 9204 ]
G [ 9100 26623 5967 347 5 1545 7674 5556 7038 2164 28746 2005 5209 1337 2531 ]
T [ 5340 816 6946 1084 11 4353 8945 8515 5097 17749 0 20052 9828 6531 11486 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages