Detailed information of deep learning profile BP001035.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP001035.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR773NQB
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.10e-03 -7.60e-04 3.49e-03 4.22e-02 8.96e-06 1.64e-02 -9.39e-04 2.55e-03 5.74e-03 -4.84e-04 1.46e-07 -8.70e-05 2.18e-03 6.12e-06 -1.49e-03 ]
C [ -5.19e-05 -3.04e-04 -1.35e-03 -5.85e-04 7.20e-02 -1.59e-03 9.05e-04 -7.29e-04 8.47e-04 1.54e-03 0.00e+00 -2.48e-05 -6.75e-04 5.90e-02 5.35e-03 ]
G [ 5.82e-03 3.42e-02 -3.41e-04 -5.53e-04 -1.99e-05 2.24e-03 3.78e-03 -5.79e-04 1.24e-03 -8.18e-05 8.38e-02 -1.57e-06 -1.46e-03 -1.27e-06 -1.03e-04 ]
T [ -1.88e-03 -4.70e-04 1.14e-03 -8.05e-04 -1.29e-05 -2.14e-03 2.25e-03 2.06e-03 -5.50e-04 2.94e-02 1.29e-06 5.64e-02 5.89e-03 1.93e-05 8.25e-03 ]

Frequency matrix

A [ 11486 6531 9828 20052 0 17749 5097 8515 8945 4353 11 1084 6946 816 5340 ]
C [ 2531 1337 5209 2005 28746 2164 7038 5556 7674 1545 5 347 5967 26623 9100 ]
G [ 9204 14992 6792 2722 4 1903 8804 5942 7186 587 28736 110 3780 62 635 ]
T [ 5532 5892 6925 3974 3 6937 7814 8740 4947 22268 1 27212 12060 1251 13678 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages