This page shows detailed deep learning-derived predictions and motifs for CTCF in foreskin fibroblast using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001036.1 |
| Cell line/tissue: | foreskin fibroblast |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DWQ |
| Model: | BPNet |
| A [ | -1.36e-03 | -1.03e-03 | 2.39e-02 | -1.85e-03 | -3.58e-03 | 6.71e-02 | -4.41e-04 | 1.24e-02 | -4.53e-03 | -1.19e-03 | -1.89e-03 | -2.06e-03 | 5.22e-03 | -2.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.36e-02 | 1.56e-01 | 4.17e-05 | 5.16e-02 | 1.39e-02 | -2.65e-04 | -7.54e-05 | -1.55e-04 | -1.05e-04 | -4.86e-06 | 1.20e-03 | 6.43e-02 | 1.43e-04 | 2.45e-02 | ] |
| G [ | -1.91e-03 | -3.68e-04 | 5.82e-03 | 1.04e-02 | -1.91e-03 | 7.14e-04 | 1.54e-01 | 6.57e-02 | 5.07e-02 | 1.37e-01 | 8.51e-02 | 3.04e-04 | 4.53e-02 | 6.95e-03 | ] |
| T [ | -2.71e-03 | -5.13e-04 | -4.89e-03 | -1.80e-03 | 1.55e-02 | -1.98e-03 | -3.47e-04 | -7.13e-04 | 2.07e-03 | -8.72e-04 | -8.03e-04 | -2.89e-03 | -2.95e-03 | -3.74e-04 | ] |
| A [ | 3919 | 12 | 28499 | 2409 | 7087 | 34199 | 33 | 15134 | 3665 | 887 | 509 | 6223 | 17483 | 4892 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 33083 | 42180 | 1739 | 23256 | 16451 | 1269 | 7 | 328 | 1923 | 271 | 690 | 31300 | 2505 | 19248 | ] |
| G [ | 2527 | 2 | 5265 | 14965 | 3773 | 3804 | 42137 | 26292 | 21966 | 40296 | 38547 | 1243 | 19369 | 13395 | ] |
| T [ | 2665 | 1 | 6692 | 1565 | 14885 | 2923 | 18 | 441 | 14641 | 741 | 2449 | 3428 | 2838 | 4660 | ] |
