This page shows detailed deep learning-derived predictions and motifs for CTCF in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001038.1 |
| Cell line/tissue: | K562 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000AKO |
| Model: | BPNet |
| A [ | -1.00e-03 | -3.71e-03 | -3.78e-03 | -7.97e-04 | -5.98e-04 | 2.24e-03 | -8.06e-04 | -3.88e-04 | -2.49e-03 | 1.91e-02 | -2.45e-03 | -6.43e-03 | -1.02e-03 | -2.80e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.84e-03 | 5.96e-02 | 6.07e-04 | 1.07e-01 | 1.73e-01 | 5.72e-02 | 8.20e-02 | 1.78e-01 | 1.44e-03 | -2.35e-03 | 1.26e-02 | 7.98e-03 | -4.83e-04 | -1.94e-03 | ] |
| G [ | 3.38e-02 | 5.31e-04 | 8.47e-02 | 2.35e-03 | 3.90e-05 | -2.23e-04 | -1.45e-04 | -8.85e-05 | -3.18e-04 | 1.56e-02 | 5.32e-02 | 6.58e-04 | 1.77e-01 | 9.60e-02 | ] |
| T [ | -3.01e-03 | 4.78e-03 | -4.12e-03 | -2.23e-03 | -7.49e-04 | -5.57e-03 | 1.14e-02 | -4.36e-04 | 6.85e-02 | -4.83e-03 | -1.72e-03 | 1.91e-02 | -1.63e-03 | -2.21e-03 | ] |
| A [ | 6004 | 3289 | 4864 | 4300 | 262 | 16600 | 739 | 364 | 4104 | 18472 | 2049 | 9118 | 580 | 3601 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 15457 | 27838 | 2484 | 45252 | 53579 | 31156 | 35032 | 53267 | 5060 | 5281 | 19854 | 8487 | 601 | 3846 | ] |
| G [ | 27304 | 3981 | 38172 | 2919 | 108 | 2033 | 449 | 149 | 1638 | 21948 | 28320 | 3550 | 51473 | 41547 | ] |
| T [ | 5596 | 19253 | 8840 | 1889 | 411 | 4571 | 18140 | 580 | 43558 | 8659 | 4137 | 33205 | 1706 | 5366 | ] |
