This page shows detailed deep learning-derived predictions and motifs for CTCF in foreskin keratinocyte using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001040.1 |
| Cell line/tissue: | foreskin keratinocyte |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR036EGV |
| Model: | BPNet |
| A [ | -1.08e-03 | -4.01e-04 | 1.79e-02 | -1.21e-03 | -3.22e-03 | 5.26e-02 | -2.54e-04 | 1.20e-02 | -3.95e-03 | -8.15e-04 | -1.45e-03 | -2.65e-03 | 6.40e-03 | -2.16e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.16e-02 | 1.24e-01 | -3.31e-04 | 3.72e-02 | 1.16e-02 | -1.50e-04 | -6.33e-05 | -1.50e-04 | -3.45e-05 | -7.54e-05 | 1.91e-04 | 5.90e-02 | -3.15e-04 | 2.34e-02 | ] |
| G [ | -1.71e-03 | -3.61e-04 | 4.18e-03 | 1.16e-02 | -1.57e-03 | 3.33e-04 | 1.26e-01 | 5.50e-02 | 3.08e-02 | 1.17e-01 | 7.76e-02 | -3.92e-04 | 4.24e-02 | 8.00e-03 | ] |
| T [ | -1.82e-03 | -5.07e-04 | -3.69e-03 | -1.89e-03 | 1.36e-02 | -1.51e-03 | -3.24e-04 | -4.93e-04 | 6.69e-03 | -5.99e-04 | -2.27e-04 | -1.95e-03 | -2.60e-03 | -5.19e-04 | ] |
| A [ | 6461 | 155 | 37610 | 4176 | 9332 | 48053 | 30 | 23420 | 5162 | 1110 | 2119 | 9763 | 23127 | 6342 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 42169 | 57638 | 2682 | 30021 | 22603 | 1473 | 5 | 763 | 2350 | 296 | 3009 | 40522 | 3129 | 26993 | ] |
| G [ | 4604 | 18 | 7610 | 21549 | 5612 | 4457 | 57790 | 32780 | 29772 | 55563 | 47521 | 2084 | 28027 | 17676 | ] |
| T [ | 4600 | 23 | 9932 | 2088 | 20287 | 3850 | 9 | 872 | 20550 | 865 | 5185 | 5464 | 3551 | 6822 | ] |
