This page shows detailed deep learning-derived predictions and motifs for CTCF in colonic mucosa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001044.1 |
| Cell line/tissue: | colonic mucosa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR380WJL |
| Model: | BPNet |
| A [ | -7.50e-04 | -2.80e-03 | -3.01e-03 | -8.47e-04 | -4.55e-04 | 4.66e-03 | -4.06e-04 | -2.39e-04 | -2.05e-03 | 1.77e-02 | -1.67e-03 | -4.87e-03 | -4.04e-04 | -2.89e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.12e-02 | 5.45e-02 | -3.27e-04 | 1.08e-01 | 1.62e-01 | 4.84e-02 | 6.80e-02 | 1.67e-01 | 2.94e-04 | -2.34e-03 | 1.13e-02 | 7.00e-03 | -2.34e-04 | -1.66e-03 | ] |
| G [ | 3.08e-02 | -2.11e-04 | 9.12e-02 | 2.71e-04 | -6.71e-05 | -2.41e-04 | -7.66e-05 | -6.32e-05 | -2.98e-04 | 1.72e-02 | 6.05e-02 | -5.14e-04 | 1.70e-01 | 9.06e-02 | ] |
| T [ | -3.43e-03 | 1.05e-02 | -3.08e-03 | -1.27e-03 | -7.47e-04 | -3.23e-03 | 1.75e-02 | -3.39e-04 | 8.15e-02 | -5.81e-03 | -1.82e-03 | 2.48e-02 | -5.51e-04 | -1.70e-03 | ] |
| A [ | 3115 | 1553 | 2716 | 2561 | 355 | 11288 | 325 | 147 | 1652 | 11584 | 883 | 4037 | 2 | 1861 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9707 | 15579 | 1222 | 26765 | 30709 | 17570 | 19012 | 31198 | 2194 | 2444 | 10508 | 4057 | 4 | 1718 | ] |
| G [ | 15727 | 1676 | 23287 | 1382 | 156 | 1114 | 220 | 64 | 903 | 12929 | 18636 | 1305 | 31631 | 25351 | ] |
| T [ | 3103 | 12844 | 4427 | 944 | 432 | 1680 | 12095 | 243 | 26902 | 4695 | 1625 | 22253 | 15 | 2723 | ] |
