Detailed information of deep learning profile BP001046.1

This page shows detailed deep learning-derived predictions and motifs for FOXA1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: FOXA1
Model ID: BP001046.1
Cell line/tissue: A549
Class: Fork head/winged helix factors
Family: FOX
Best Match(es): MA0148.4 MA0148.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55317  
Source: ENCSR000BPX
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.97e-03 3.83e-03 2.21e-03 6.80e-04 6.61e-06 1.93e-02 1.79e-02 3.26e-02 0.00e+00 2.31e-02 ]
C [ -2.13e-04 -4.21e-04 -5.08e-05 -1.14e-05 -2.25e-06 1.32e-03 5.48e-05 0.00e+00 3.01e-02 -3.30e-05 ]
G [ -3.30e-04 1.58e-03 -8.49e-04 2.04e-02 2.95e-06 2.40e-05 -2.24e-05 -1.27e-06 0.00e+00 -1.74e-05 ]
T [ 4.56e-03 -5.27e-04 3.11e-03 -5.28e-05 2.79e-02 -1.61e-06 -3.13e-05 4.27e-06 8.89e-06 -1.40e-04 ]

Frequency matrix

A [ 4220 4728 4567 2320 274 7457 9421 10577 0 9958 ]
C [ 1230 1816 417 209 521 2158 510 13 10678 67 ]
G [ 900 2357 1713 7376 194 586 343 49 1 100 ]
T [ 4332 1781 3985 777 9693 481 408 43 3 557 ]

11 profiles found for the same TF (FOXA1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001104.1 FOXA1 ENCSR865RXA HepG2 Homo sapiens
Showing 1 profiles of page 2 from 2 pages