Detailed information of deep learning profile BP001047.1

This page shows detailed deep learning-derived predictions and motifs for GATA2 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GATA2
Model ID: BP001047.1
Cell line/tissue: K562
Class: Other C4 zinc finger-type factors
Family: C4-GATA-related
Best Match(es): MA0036.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P23769  
Source: ENCSR000DKA
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.35e-04 -1.80e-04 -1.10e-04 5.97e-02 -1.40e-06 6.94e-06 1.85e-03 -8.62e-04 2.40e-04 -6.05e-04 -1.99e-04 4.94e-04 -4.71e-05 -1.13e-04 -1.82e-04 1.25e-03 ]
C [ 6.89e-03 9.82e-05 3.81e-05 6.22e-06 1.37e-06 6.20e-02 -2.23e-04 1.35e-03 8.95e-04 1.04e-03 1.56e-03 5.99e-04 1.76e-03 2.33e-03 5.05e-03 7.10e-03 ]
G [ 2.74e-03 -2.36e-04 6.47e-05 1.61e-06 2.59e-06 2.06e-06 1.53e-04 2.83e-03 2.25e-04 1.55e-04 8.60e-04 7.83e-04 7.03e-04 8.80e-04 8.43e-04 5.01e-04 ]
T [ -1.69e-03 1.55e-02 2.61e-02 1.66e-06 5.28e-02 3.34e-06 1.02e-02 -2.47e-04 -4.70e-04 4.88e-04 -9.39e-04 -3.32e-04 -1.48e-04 -4.31e-04 -6.94e-04 -7.77e-04 ]

Frequency matrix

A [ 17889 12345 17088 93389 305 0 26771 17217 22021 25088 24124 27071 24122 23707 23847 28969 ]
C [ 31594 21844 7235 58 57 93651 2213 24190 23942 24196 22810 22544 22601 26748 27780 27391 ]
G [ 20324 8344 6829 184 110 0 3261 28671 16247 17587 18408 18886 18577 17523 17239 15628 ]
T [ 23844 51118 62499 20 93179 0 61406 23573 31442 26780 28309 25150 28351 25673 24785 21664 ]

6 profiles found for the same TF (GATA2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000483.1 GATA2 ENCSR000EYB SH-SY5Y Homo sapiens
BP000642.1 GATA2 ENCSR257RKC K562 Homo sapiens
BP000745.1 GATA2 ENCSR897LDT HepG2 Homo sapiens
BP000755.1 GATA2 ENCSR000EWG K562 Homo sapiens
BP000812.1 GATA2 ENCSR706VOO SK-N-SH Homo sapiens
BP001194.1 GATA2 ENCSR000BKM K562 Homo sapiens
Showing 6 profiles of page 1 from 1 pages
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