This page shows detailed deep learning-derived predictions and motifs for CTCF in placenta using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001050.1 |
| Cell line/tissue: | placenta |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR291YNH |
| Model: | BPNet |
| A [ | -1.49e-03 | -3.77e-03 | -3.54e-03 | -9.97e-04 | -8.15e-04 | 3.69e-03 | -7.87e-04 | -3.16e-04 | -2.57e-03 | 1.86e-02 | -2.12e-03 | -6.41e-03 | -8.51e-04 | -2.79e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.98e-03 | 5.22e-02 | 3.22e-05 | 1.03e-01 | 1.59e-01 | 5.52e-02 | 7.69e-02 | 1.77e-01 | 1.10e-03 | -2.49e-03 | 1.34e-02 | 8.64e-03 | -4.91e-04 | -1.67e-03 | ] |
| G [ | 2.88e-02 | 2.20e-04 | 7.91e-02 | 1.27e-03 | -6.95e-05 | -2.28e-04 | -1.45e-04 | -8.30e-05 | -2.19e-04 | 1.82e-02 | 5.73e-02 | 2.82e-04 | 1.71e-01 | 9.21e-02 | ] |
| T [ | -2.97e-03 | 6.57e-03 | -3.34e-03 | -1.90e-03 | -1.14e-03 | -5.20e-03 | 1.25e-02 | -4.39e-04 | 7.71e-02 | -5.35e-03 | -2.22e-03 | 2.00e-02 | -1.35e-03 | -2.03e-03 | ] |
| A [ | 5290 | 2988 | 4435 | 4027 | 385 | 16608 | 598 | 95 | 2865 | 17717 | 1472 | 7321 | 259 | 3090 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14857 | 23770 | 2074 | 40812 | 47850 | 26845 | 29762 | 48534 | 3615 | 4215 | 16988 | 7446 | 242 | 3156 | ] |
| G [ | 23187 | 3021 | 34333 | 2355 | 136 | 1931 | 419 | 34 | 1329 | 19447 | 27128 | 2266 | 47354 | 38013 | ] |
| T [ | 5537 | 19093 | 8029 | 1677 | 500 | 3487 | 18091 | 208 | 41063 | 7492 | 3284 | 31838 | 1016 | 4611 | ] |
