This page shows detailed deep learning-derived predictions and motifs for CTCF in activated CD8-positive and alpha-beta T cell using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP001053.1 |
| Cell line/tissue: | activated CD8-positive and alpha-beta T cell |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR347MXL |
| Model: | BPNet |
| A [ | -1.46e-03 | -7.81e-04 | 2.23e-02 | -1.40e-03 | -4.27e-03 | 6.48e-02 | -3.01e-04 | 1.25e-02 | -3.23e-03 | -5.92e-04 | -1.31e-03 | -2.43e-03 | 7.25e-03 | -2.46e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.68e-02 | 1.45e-01 | -2.87e-04 | 5.13e-02 | 1.29e-02 | -2.66e-04 | -5.74e-05 | -1.00e-04 | -2.56e-04 | -3.63e-05 | 6.90e-04 | 7.30e-02 | 3.39e-05 | 2.51e-02 | ] |
| G [ | -1.52e-03 | -2.93e-04 | 4.98e-03 | 8.55e-03 | -2.13e-03 | 3.21e-04 | 1.44e-01 | 6.12e-02 | 4.69e-02 | 1.36e-01 | 9.16e-02 | -1.11e-04 | 4.45e-02 | 8.19e-03 | ] |
| T [ | -2.42e-03 | -5.54e-04 | -4.91e-03 | -1.72e-03 | 1.71e-02 | -1.82e-03 | -2.41e-04 | -3.48e-04 | 4.94e-03 | -3.18e-04 | -5.10e-04 | -2.58e-03 | -2.66e-03 | -5.86e-04 | ] |
| A [ | 3662 | 820 | 25412 | 2475 | 5830 | 32580 | 327 | 13821 | 2148 | 377 | 1143 | 5374 | 14880 | 3945 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 30396 | 37507 | 2225 | 22042 | 15966 | 1162 | 84 | 348 | 1471 | 142 | 1948 | 28528 | 2408 | 19611 | ] |
| G [ | 2497 | 307 | 5773 | 13244 | 3184 | 2949 | 38338 | 24334 | 22351 | 38131 | 32806 | 1687 | 19517 | 11430 | ] |
| T [ | 2367 | 288 | 5512 | 1161 | 13942 | 2231 | 173 | 418 | 12953 | 272 | 3024 | 3333 | 2118 | 3936 | ] |
