Detailed information of deep learning profile BP001054.1

This page shows detailed deep learning-derived predictions and motifs for EBF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EBF1
Model ID: BP001054.1
Cell line/tissue: GM12878
Class: Rel homology region (RHR) factors
Family: Early B-Cell Factor-related factors
Best Match(es): MA0154.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UH73  
Source: ENCSR000BGU
Model: BPNet

Contribution weight matrix (CWM)

A [ -6.22e-04 -1.21e-06 -6.88e-06 -7.05e-06 -8.24e-04 4.23e-03 -3.35e-04 4.49e-03 -1.13e-06 2.08e-02 ]
C [ 2.43e-03 1.24e-01 9.45e-02 1.17e-01 1.47e-02 -3.49e-04 -3.03e-06 -2.09e-06 5.69e-06 -6.88e-04 ]
G [ -1.93e-04 9.26e-06 0.00e+00 0.00e+00 -2.89e-04 1.65e-03 9.94e-02 5.35e-02 1.24e-01 1.66e-02 ]
T [ 3.57e-02 1.54e-06 3.39e-04 -1.77e-05 2.26e-03 6.45e-04 -5.67e-05 -4.09e-04 -6.61e-06 -1.06e-03 ]

Frequency matrix

A [ 8317 627 1442 460 23508 25121 5733 20675 246 34061 ]
C [ 13404 72524 65648 72345 25691 7449 1987 2314 756 8100 ]
G [ 9995 706 174 75 3805 19580 64088 43768 72254 24698 ]
T [ 42180 39 6632 1016 20892 21746 2088 7140 640 7036 ]

1 profiles found for the same TF (EBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000992.1 EBF1 ENCSR000DZQ GM12878 Homo sapiens
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