Detailed information of deep learning profile BP001054.1

This page shows detailed deep learning-derived predictions and motifs for EBF1 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EBF1
Model ID: BP001054.1
Cell line/tissue: GM12878
Class: Rel homology region (RHR) factors
Family: Early B-Cell Factor-related factors
Best Match(es): MA0154.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q9UH73  
Source: ENCSR000BGU
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.06e-03 -6.61e-06 -4.09e-04 -5.67e-05 6.45e-04 2.26e-03 -1.77e-05 3.39e-04 1.54e-06 3.57e-02 ]
C [ 1.66e-02 1.24e-01 5.35e-02 9.94e-02 1.65e-03 -2.89e-04 0.00e+00 0.00e+00 9.26e-06 -1.93e-04 ]
G [ -6.88e-04 5.69e-06 -2.09e-06 -3.03e-06 -3.49e-04 1.47e-02 1.17e-01 9.45e-02 1.24e-01 2.43e-03 ]
T [ 2.08e-02 -1.13e-06 4.49e-03 -3.35e-04 4.23e-03 -8.24e-04 -7.05e-06 -6.88e-06 -1.21e-06 -6.22e-04 ]

Frequency matrix

A [ 7036 640 7140 2088 21746 20892 1016 6632 39 42180 ]
C [ 24698 72254 43768 64088 19580 3805 75 174 706 9995 ]
G [ 8100 756 2314 1987 7449 25691 72345 65648 72524 13404 ]
T [ 34061 246 20675 5733 25121 23508 460 1442 627 8317 ]

1 profiles found for the same TF (EBF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000992.1 EBF1 ENCSR000DZQ GM12878 Homo sapiens
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